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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886501.1_cds_XP_016440637.1_36077
CDS Infomation

[gene=LOC107766374] [db_xref=GeneID:107766374] [protein=CBS domain-containing protein CBSCBSPB5-like] [protein_id=XP_016440637.1] [location=complement(join(16166..16348,22330..22419,22523..22608,22835..22968,23058..23164,25531..25589,25676..25781,25944..26010,26108..26221,26319..26400,26535..26705,26783..26915,27077..27245,28575..28729))] [gbkey=CDS]
Sequence

ATGGCAGCGAGTGTAGGAGGAAGAACGCCGTCGAGAAGAAGCTTGTCAATGAAAAGCTTA
TCCTCCCATTCGAAGAAGAAAACAGGCGGCGTCGATAATGTAGGAGGACTCCCTGTTTCT
CCTCATCGCAAATCTCTACCTTCTTCTCGTTCCATGGGTCTGGCTGGGGAGCGGACAGTG
AAGAGACTTAAGTTGTCTAAAGCTTTAACAGTACCTGAGACTACAAGTATTTATGAAGCA
TGCCGCAGGATGGCTGCTCGCAGAGTTGATGCTCTATTGCTGACCGATTCAAATGCATTA
CTATGTGGTATCTTGACGGATAAGGATATTGCAACAAGAGTTATTGCGGGCGAAGTCAAT
ATTCAGGAAACACCTGTTTCAAAGGTTATGACGAAACATCCTGTTTTTGTGCTTTCTGAC
ACACTTGCTGTAGAAGCATTGCAGAAAATGGTGCTAGGAAAATTTAGACATTTGCCAGTT
GTAGAAAATGGAGAGGTCATTGCATTGCTTGATATAGCAAAATGTCTTTATGATGCTATT
GCTCGCCTTGAAAGGGCAGCAGAGAAAGGAAAGGCCATAGTAGCGGCTGTTGAGGGAGTT
GAAAAAAACTGGGGAGCGTGTATTTCTGGTGGCTCTGATTCCTTTATTGAAACACTTCGG
GAGCGAATGTTCCGGCCTTCACTCTCTACCATCATTTCTGAGAATCCAAAGACTGTTACA
GTTGAACCAAGCGATAATGTTCTAGACGCAGCTAAAAAGATGCTTGAAACTCAAACAAGC
TCCGCAGTCGTGGCCGTTCACAGGAAACCACGAGGAATTTTAACGTCAAAGGACATATTA
ATGCGAGTTATAGCACAAGATCTTTCGCCAAAGTCCATTCTTGTTGAGAGGGTAATGACT
CCCAATCCTGAATGTGCTACGACGGATACACCTATTGTTGATGCTTTACATACAATGCAT
GATGGGAAATTTTTACACCTTCCTGTAGTTGATAGAGATGGAATTGTAGTTGCTGTGGTT
GATGTGCTTCATATCACTCATGCAGCTGTAGCCACTGTGGGAAATACTGCTGGGGTGAAT
AGCGAAGTTGCAAACACTAGGATGCAAAAGTTTTGGGATTCAGCTATGGAATTGTCCCCA
GATGAGGAGGAAGAGACACGGAGCATTGGTTCCTTGAAATTGGCTTCTGAAGGGGCAGAA
TTGAGAAGATCTATTTCCTATCCTTCATCGAGCCTTCCAAATACTTTTGCATTCAAGATT
CAAGACAGAGCAGGGAGGATGCACAGATTCAACTGCGATATTCGGAGCATGACAGATCTC
ATAACTGCAATTATTCAGAGAGTGGGGGATGATATCGACCGAAAGAACCTTCCTCAAATT
CTGTATGAAGACGAAGACCATGACAAGGTTGTATTAGCAACAAAGAGTGATCTCACAGCT
GCCGTTGACCATGCAAGATCTGCAGGTTGGAAGGGACTAAGATTGCACTTAGACTATTCA
GGAAAGTGTGGCCGTAGGAAGGGTTCAAGCTCCAACAATTTGGATTATGCTCATACAGAA
TCTGTATGGGCTTCAGCTTACAGCGCCGTAGCAGCTGGTGCGGCATTAGTTGCAGGTTTA
GGCGTAATAGCATTCTTAAGGAGATCTAGTAACTGA

Peptide Sequence

PEP ID

XP_016440637.1
PEP Infomation

PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Nicotiana tabacum]
Sequence

MAASVGGRTPSRRSLSMKSLSSHSKKKTGGVDNVGGLPVSPHRKSLPSSRSMGLAGERTV
KRLKLSKALTVPETTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAGEVN
IQETPVSKVMTKHPVFVLSDTLAVEALQKMVLGKFRHLPVVENGEVIALLDIAKCLYDAI
ARLERAAEKGKAIVAAVEGVEKNWGACISGGSDSFIETLRERMFRPSLSTIISENPKTVT
VEPSDNVLDAAKKMLETQTSSAVVAVHRKPRGILTSKDILMRVIAQDLSPKSILVERVMT
PNPECATTDTPIVDALHTMHDGKFLHLPVVDRDGIVVAVVDVLHITHAAVATVGNTAGVN
SEVANTRMQKFWDSAMELSPDEEEETRSIGSLKLASEGAELRRSISYPSSSLPNTFAFKI
QDRAGRMHRFNCDIRSMTDLITAIIQRVGDDIDRKNLPQILYEDEDHDKVVLATKSDLTA
AVDHARSAGWKGLRLHLDYSGKCGRRKGSSSNNLDYAHTESVWASAYSAVAAGAALVAGL
GVIAFLRRSSN

Transcript Sequence

Gene sequence data has not been registered.